UGENE is a free and open-source molecular biology software suite that provides a wide range of tools for sequence analysis, multiple sequence alignment, phylogenetic tree construction, and other bioinformatics tasks. It is designed to be user-friendly and accessible to researchers of all levels of experience, from beginners to experts.
UGENE, a comprehensive molecular biology software suite, is a versatile tool for a wide array of biological data types, making it indispensable for researchers.
It accommodates DNA and RNA sequences, multiple sequence alignments, phylogenetic trees, next-generation sequencing (NGS) data, protein sequences, structures, metabolic pathways, and gene regulatory networks.
UGENE's extensive features encompass sequence editing, visualization, comparison, and alignment, as well as BLAST searches, ORF finding, repeat detection, and motif searches. Moreover, it facilitates phylogenetic tree construction and offers tools for NGS data analysis, including read alignment, variant detection, and metagenomics analysis.
For protein analysis, UGENE assists in primary, secondary, and tertiary structure prediction, homology searches, site-directed mutagenesis, and protein-protein docking. Additionally, it provides utilities for metabolic pathways and gene regulatory network analysis.
UGENE stands out for its user-friendliness and accessibility, catering to researchers of all experience levels. It operates as free and open-source software, eliminating licensing fees, and benefits from continuous development and maintenance, resulting in regular feature enhancements and bug fixes.
UGENE is a robust and adaptable molecular biology software suite that suits diverse research applications. Its user-friendly nature, accessibility, and cost-effectiveness make it a valuable asset for researchers across various biological disciplines, including molecular biology, genetics, genomics, proteomics, and systems biology.
Unipro UGENE podcast #1: Making a multiple sequence alignment from FASTA file